Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNNYSLKVKN---KQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDF--LLNN-SGNIPKSI-----SQNVTLISSSSNIPNDIT-----KDFLLSLLKSKFE-NNRQTFDKIYNILNIEAIPS----------NVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQIEEYQSKEEVINDYINL |
| 3ZDQ Chain:A ((342-571)) | LEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMD---GRTVLVIAHRLSTIK-NANMVAVLDQGKITEYGKHEELLSK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75904 for 1542 contacts (-49.2/contact) +
2D Compatibility (PS) -20736 + (NN) 4281 + (LL) 672
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -104737.0 ( -67.92 by residue)
QMean score : 0.422
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