Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLS-------SLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELIT---SRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKL--LGVVLNRMPKDKSASYYAYYGTDES-------------------------- |
| 3K9G Chain:A ((26-267)) | ---------------------------------------KPKIITIASIKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINVD-NNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALL-CSDYVIIPMTAEKWAVESLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEILKTKDRFLGTISENKDYIKEYENILEIFLKKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86794 for 1425 contacts (-60.9/contact) +
2D Compatibility (PS) -21001 + (NN) -16304 + (LL) 2372
1D Compatibility (HY) -11600 + (ID) 1950
Total energy: -135277.0 ( -94.93 by residue)
QMean score : 0.415
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