Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLEN-IDL--NYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL
4ZZ9 Chain:A ((59-244))
-----------------------------------------------------FSTGIQNVSKFGNGSYSGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQN--KTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIG---TATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKSA
General information:
TITO was launched using:
RESULT:
Template:
4ZZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86723 for 1295 contacts (-67.0/contact) +
2D Compatibility (PS) -18233 + (NN) -5754 + (LL) 4908
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -122652.0 ( -94.71 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_4ZZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZZ9-query.scw
PDB file :
Tito_Scwrl_4ZZ9.pdb
: