Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
3R6F Chain:A ((7-103))
GCIFCTLYRK--GANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKF--GFERYNILQNNGN--HQEVFHVHFHVIPFVSA
General information:
TITO was launched using:
RESULT:
Template:
3R6F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53503 for 653 contacts (-81.9/contact) +
2D Compatibility (PS) -10266 + (NN) -4525 + (LL) 404
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -77740.0 ( -119.05 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3R6F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6F-query.scw
PDB file :
Tito_Scwrl_3R6F.pdb
: