Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIANSITDLIGKTPIVKLNRLPEAG--SADVYVKLEFQNPGGSVKDRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLERRKLLQAYGAKLVLTPGP---DGMKGAIAKAEELAKE-NNYFVPQQFHNPANPAVHEETTGPEIVEAFGKDG-LDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPE-----ESPVLSGGSPSPHKIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALDLAKELGAGKKVLAIVASNGERYLSTPLYNFED |
| 4COO Chain:A ((106-408)) | ----------IGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQC--DGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMT-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4COO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86261 for 2648 contacts (-32.6/contact) +
2D Compatibility (PS) -32457 + (NN) -18159 + (LL) 1008
1D Compatibility (HY) -24000 + (ID) 6300
Total energy: -166169.0 ( -62.75 by residue)
QMean score : 0.590
|
|
|