Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4QIF Chain:C ((12-101))
---EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGHGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL---------PKGIS-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49816 for 714 contacts (-69.8/contact) +
2D Compatibility (PS) -9575 + (NN) -2510 + (LL) 5904
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -64447.0 ( -90.26 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIF-query.scw
PDB file :
Tito_Scwrl_4QIF.pdb
: