Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEVVIIDAVRTPIGKFGGSLKDISAVDLGATALKGVLERANIAPE----RVDQVIFGNVLQAG-LGQNVARQIAIKAGIPYKVPGVTINEVCGSGLKSVMLGRQAIQLGEADIVAVGGTENMSQAPLLLNPELAGEEINPKKLRNSMLIDGLTDVYGEYHMGITAENVAEKFSVTREEQDEFAHNSQMKAASAQEKKLFEEEIIPVKLP----------DGSFFEADETIRANSTLEKLATLKSVFKEGGTVTAGNASGINDGASAIILMSKEKAVAENIPYIATIKVTSEVGVDPALMGYAPYYAVNEALTKGGYSIDEIDLFHLNEAFASQSVAVARDLKIPEEKLNIYGGAIALGHPIGASGARIIASLLNELKHENKHIGVASLCVGGGIGIAIILERA |
| 4UBV Chain:B ((13-398)) | ----VIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQ-GSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGAN---AGPD---RSLIRAQSWD--IDLPNQFE---AAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLR-ETTMAGLGELKPVL-EGGIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIER- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161695 for 3576 contacts (-45.2/contact) +
2D Compatibility (PS) -40124 + (NN) -14489 + (LL) 1344
1D Compatibility (HY) -13600 + (ID) 6550
Total energy: -235114.0 ( -65.75 by residue)
QMean score : 0.489
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