Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
2ZZA Chain:B ((5-160))
-MIAALANNRV--IGLDNKMPWHLPAELQLFKRATLGKPIVMGRNTFESIGRPLPGRLNIVLSRQTDYQPEGVTVVATLEDAVVAAGDVEELMIIGGATIYNQCLAAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEHESYAADDKNPHNYRFSLLER-
General information:
TITO was launched using:
RESULT:
Template:
2ZZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97266 for 1150 contacts (-84.6/contact) +
2D Compatibility (PS) -16687 + (NN) -4649 + (LL) -124
1D Compatibility (HY) -12000 + (ID) 3300
Total energy: -134026.0 ( -116.54 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2ZZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZZA-query.scw
PDB file :
Tito_Scwrl_2ZZA.pdb
: