Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPI----PSSTLKACQDADAILLGAIGGPKWDNAPKRPEDGLLALRKALGLFANIRPI-QVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWDESAAVDSLTYTRAEIERIIEKAFEIA-ATRNKKVTSVDKANV--LASSKLWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAG-FLTADLGG---NTTTTDFTNEVLKQIEGGE |
| 2D1C Chain:A ((22-355)) | ----ITVIPGDGIGPECVEATLKVLEAA--KAPLAYEVRE-----AGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGE----KSANVTLRKLFETYANVRPVREFPNVPTPYAG------RGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAF-EQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIG-NEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRY-LEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAKTTEYTEAIIQNL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139323 for 2833 contacts (-49.2/contact) +
2D Compatibility (PS) -35285 + (NN) -13344 + (LL) 1072
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -214580.0 ( -75.74 by residue)
QMean score : 0.490
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