Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKPIVR-DTFFLQQKSQMAS---RADVSLAKDLQDTLHANQNYCVGMAANMIGSLKRVIIINVG--ITNLVMFNPVLVAKSDPYETEESCLSLVG-CRSTQRYRHITISYRDINWKEQQIKLTDFPAQICQHELDHLEGILI
1WS0 Chain:A ((2-142))
AVLEIIKHPNEVLETPCERVINFDKKLVKLLKDMHETMLIA--DGVGLAAPQVGVSLQVAVVDVDDDTGKIELINPSILEKRGEQVGPEGCLSFPGLYGEVERADYIKVRAQNRRGKVFLLEAEGFLARAIQHEIDHLHGVLF
General information:
TITO was launched using:
RESULT:
Template:
1WS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86579 for 1026 contacts (-84.4/contact) +
2D Compatibility (PS) -13753 + (NN) 3930 + (LL) 40
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -104512.0 ( -101.86 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1WS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WS0-query.scw
PDB file :
Tito_Scwrl_1WS0.pdb
: