Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKFQVISHPLIQHKLSILRRTTTSTKDFRELVDEIAMLMGYEVSRDLPLEDVEIQTPVA-TTVQKQLA-GKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETF-------QPVEYLVKLPEDID-QRQIFVVDPMLATGGSAILAVDSLKKRGAASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGTK
1XTT Chain:A ((2-216))
--PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG--
General information:
TITO was launched using:
RESULT:
Template:
1XTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161805 for 1672 contacts (-96.8/contact) +
2D Compatibility (PS) -21890 + (NN) 848 + (LL) 152
1D Compatibility (HY) -17600 + (ID) 3450
Total energy: -203745.0 ( -121.86 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_1XTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTT-query.scw
PDB file :
Tito_Scwrl_1XTT.pdb
: