Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3ELC Chain:B ((7-162))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK-
General information:
TITO was launched using:
RESULT:
Template:
3ELC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108438 for 1290 contacts (-84.1/contact) +
2D Compatibility (PS) -16984 + (NN) -9509 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 4950
Total energy: -154245.0 ( -119.57 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3ELC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ELC-query.scw
PDB file :
Tito_Scwrl_3ELC.pdb
: