Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQSFNAPYEAIG-EELLSQLVDTFYERVASHPLLKPIFPSDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMDHVGLEGEIREFLFGRLELTARHMVNQTEAEDRSS
2BKM Chain:A ((2-126))---QWQTLYEAIGGEETVAKLVEAFYRRVAAHPDLRPIFPDDLTETAHKQKQFLTQYLGGPPLYTAEHGHPMLRARHLRFEITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAHHMVNTPDH-----


General information:
TITO was launched using:
RESULT:

Template: 2BKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 457 -60207 -131.74 -485.54
target 2D structure prediction score : 0.90
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -131.74
2D Compatibility (Sec. Struct. Predict.) : 0.90
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_2BKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BKM-query.scw
PDB file : Tito_Scwrl_2BKM.pdb: