Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAISTFAPQKNVQLELE
4J6W Chain:D ((6-69))----SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNT-VSQMVYKHAISTVVPSRPVR----


General information:
TITO was launched using:
RESULT:

Template: 4J6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 217 -41389 -190.73 -646.70
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain D : 0.84

3D Compatibility (PKB) : -190.73
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_4J6W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J6W-query.scw
PDB file : Tito_Scwrl_4J6W.pdb: