Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYPYPNEIGRYGDFGGKFVPETLMQPLDEIQTAFKQIKDDPAFREEYYKLLKDYSGRPTALTYADRVTEYLGG-AKIYLKREDLNHTGSHKINNALGQALLAKKMGKTKIIAETGAGQHGVAAATVAAKFGFSCTVFMGEEDVARQSLNVFRMKLLGAEVVPVTSG---------------NGTLKDATNEAIRYWVQHCEDHFYMIGSVVGPHPYPQVVREFQKMIGEEAKDQLKRIEGTMPDKVVACVGGGSNAMGMFQAFLNEDVELIGAEAAGKGIDTPLHAATISKGTVGVIHGSL-----------TYLIQDEFGQIIEPYSISAGLDYPGIGPEHAYLHKSGRVTYDSITDEEAVDALKLLSEKEGILPAIESAHA---LAKAFKLAKGMDRGQLILVCLSGRGDKDVNTLMNVLEEEVKAHV
4QYS Chain:B ((76-428))-------------------------------------------------------GRPTPIIRAKRLEEYLGNNIKIYLKMESYTYTGSHKINSALAHVYYAKLDNAKFVTTETGAGQWGSSVALASALFRMKAHIFMVRTSYYAKPYRKYMMQMYGAEVHPSPSDLTEFGRQLLAKDSNHPGSLGIAISDAVEY--AHKNGGKYVVGSVVNSD------IMFKTIAGMEAKKQMELI-GEDPDYIIGVVGGGSNYAALAYPFLGD--ELRSGKVRRKYIAS--GSSEVPKMTKGVYKYDYPDTAKLLPMLKMYTIGSDF---VPPPVYAGGLRYHGVAPTLSLLISKGIVQARDYSQEESFKWAKLFSELEGYIPAPETSHALPILAEIAEEAKKSGERKTVLVSFSGHGLLDLGNYASVLFK------


General information:
TITO was launched using:
RESULT:

Template: 4QYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1916 60812 31.74 188.27
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : 31.74
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_4QYS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QYS-query.scw
PDB file : Tito_Scwrl_4QYS.pdb: