Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDVQHIDHSFTIGKKGRENEVPVLKDVSLSVAKGEIACIVGRSGSGKSTLLNLISGYISPTKGRIVINGTDVTGFNEKEWAQFRLDHFGFIFQ--SFQLIPGLTTYENVEMPLALKGIKPSERKQKVQDMLKRVGLENHAAHYPNELSGGQQQRVSIARALILNPSIILADEPTGSLDSETEHEVLELIQQLNRERGITFVIITHDDEVASIGHSKFQLHDGVLKGGITVEV
4HLU Chain:C ((20-211))-----------------RYNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLAAA-GEIFLDGSPADPFLLRK-------NVGYVFQNPSSQII-GATVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSGLAAADPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNE-GKGIILVTH--ELEYLDDMDFILH------------


General information:
TITO was launched using:
RESULT:

Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 873 -34302 -39.29 -180.53
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -39.29
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_4HLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HLU-query.scw
PDB file : Tito_Scwrl_4HLU.pdb: