Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSNEKRFPEGFLWGGAVAANQVEGAYNEGGKGLSTADVSPNGIMSPFDESMTSLNLYHNG---IDFYHRYKEDIALFAEMGFKAFRTSIAWTRIFPNGDEEEPNEEGLRFYDDLFDELLKHHIEPVVTISHYEMPLGLVKNYGGWKNRKVIEFYERYAKTVFKRYQHKVKYWMTFNEINVVLHAPFTGGGLVFEEG-ENKLNAMYQAAHHQFVASALAVKAGHDIIPDSKIGCMIAATTTYPMTSK-PEDVFAA-MENERKTLFFSDVQARGAYPGY----MKRYLAENNIEIEMAEGDEELLK--EHTVDYIGFSYYMS--MAASTDPEELAKSGGNLLGG-----------VKNPYLKSSEWGWQIDPKGLRITLNTLYDRYQ--KPLFIVENGLGAVDKVEEDGTIQDDYRINYLRDHLIEAREAIADGVELIGYTSWGPIDLVSASTAEMKKRYGFIYVDRDNEGNGTFNRIKKKSFNWYQQVIATNGESL
4PBG Chain:B ((3-465))-----KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWD------------KYLEDNYWYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFP-EVNYWTTFNEIGPIGDGQYLVGK--FPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFDTQ-----ERYPKKSAHWYKKLAETQ----


General information:
TITO was launched using:
RESULT:

Template: 4PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2522 36340 14.41 83.35
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 14.41
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_4PBG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PBG-query.scw
PDB file : Tito_Scwrl_4PBG.pdb: