Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITVKNIRKAFK--DLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLLERPDQGLIEIGEAKLNAEKFTRKEAHRLRQQTAMVFQNYNLFKNKTALQNITEALI-VAQHKPRDEAKRIGM-EILKQV--GLEHKADSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPELVTGVLQVIKSIAEKQTTMIIVTHEMAFAKEVADQVIFMADGHIIEQGTPEELFDHPKNERTKRFIKQVGEPAELI
2FGK Chain:B ((8-236))-ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIP-----ENGQVLIDGHDLALADPNWLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKIC-KGRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPES-----------------


General information:
TITO was launched using:
RESULT:

Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1126 4766 4.23 21.37
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 4.23
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_2FGK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGK-query.scw
PDB file : Tito_Scwrl_2FGK.pdb: