Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG-GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE-LVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP
3RIH Chain:D ((36-285))
-----MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVIL-TSSITGPVTGYPGW-SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLP
General information:
TITO was launched using:
RESULT:
Template:
3RIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165077 for 2169 contacts (-76.1/contact) +
2D Compatibility (PS) -27118 + (NN) -10612 + (LL) 584
1D Compatibility (HY) -18000 + (ID) 4700
Total energy: -224923.0 ( -103.70 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3RIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIH-query.scw
PDB file :
Tito_Scwrl_3RIH.pdb
: