Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPY-MRPGLDEPAMAALEAEALRQARAAFET-RPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVC----GVM-AGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAV-QHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTAD-----------RDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4A6R Chain:A ((34-449)) | ------------------------------------RVMTRGEGVYLWDS-EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP-FYNTFF---KTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKP------EKKTLIGRWNGYHGSTIGGASLGGMKYMH--DLPIPGMAHIEQPWWYKHGKDMT-PDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIA--GGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFE-HVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLEEF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243258 for 3518 contacts (-69.1/contact) +
2D Compatibility (PS) -43825 + (NN) -28318 + (LL) 3952
1D Compatibility (HY) -12800 + (ID) 4300
Total energy: -328549.0 ( -93.39 by residue)
QMean score : 0.493
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