Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLG---FAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG |
| 3TR9 Chain:A ((25-293)) | --FSEPAVMGIINVSPNSFYHPHL--DLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQL-DDALTTVSALKTPVCLMHFPSETRKPG-STTHF-YFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLN------QPPENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRSVD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134752 for 2222 contacts (-60.6/contact) +
2D Compatibility (PS) -29145 + (NN) -21280 + (LL) 396
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -204481.0 ( -92.03 by residue)
QMean score : 0.506
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