Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLCGCIRGKPMTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQAQSIPLILEGHDMIGQAQTGTGKTAAFALPLLSRI-DPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGV------VAVYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEK--LLATVQRLVLDEADEML---KLGFMDDLEVIFEALPESR-QTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHADQKAGSIQRLLEVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIESLKDGSLDIVIATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQKVGEVRLPDAETVLEARLARLAASLTPLLDSAVEQRGAVRDELCRRLGCDAETLAAALLARLTAGKALDLESVRREQPLTPSAPRERADRGERGERPERSGERRPMAPPSEGRARCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEANLERLLTKLKDTRVAGKALRLRRYRED |
| 3DKP Chain:A ((36-242)) | -----------------------INSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISE---GTGFRIHMIHKAAVAAKKFGPKSS---KKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDG--GFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129893 for 1462 contacts (-88.8/contact) +
2D Compatibility (PS) -20912 + (NN) -12296 + (LL) 28144
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -155257.0 ( -106.19 by residue)
QMean score : 0.486
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