Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSAWNEEWRRRRLPALAGQEWDLIVVGGGISGAGILREAARRGWRCLLLEQRDFAWGTSSRSSKMVHGGLRYIAKGQWRLTRDSVRERQRLLGEAPGLVEPLSFVMAHYRGGFPGPRLFGGLLSVYDALAGRR-NHRFYDAAALRYLAPGLKEQRLLGGTRFFD-AVTDDARLVLRVLAEARHDGGEAFNGMRVRELLREGGQVVGLRAEDRESGELFDFRCRALALATGAWADELRQP-G--GSEHIRPLRGSHLLLPAWRLPVAHAFSFMHATDRRPVFVFPW-EGATVVGTTDLDHRDGLGEDARISRAELDYLLAACAQQFPAAAIEARDVLSTWAGVRPVVSSGDDSGKPSDEKREHVLWREPGCVTLAG---GKLTTFRPLAVEVLQACAPLLGRTVTDDGAAVFGACEGPLIDGLGSGQRRRLAGRYGRDLVRLKRLVDTLGTDCVGASETLWAELAFAAEAEMVLHLDDLLLRRTRLGLLLPGGGAAYLPRIRALCQARLGWDDPRWEREQQAYLDLWRRHYSLPV |
| 1Y56 Chain:B ((3-355)) | ------------------PEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQF--NDEANVRVMKRSVELWKKYSEEYGFSFKQTGYLFLLYDDEEVKTF--K---RNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNK------GIIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGTINPMVIS-F-KYGHAYLTQTFHGGIIGGIGYEIG---PTYDLTPTYEFLREVSYYFTKIIPALK--NLLILRTWAGYYAKTPDSNPAIGRIE-----E---LNDYYIAAGFSGHGFMMAPAVGEMVAELITKG---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162243 for 2986 contacts (-54.3/contact) +
2D Compatibility (PS) -36386 + (NN) -5852 + (LL) 12828
1D Compatibility (HY) -6000 + (ID) 2550
Total energy: -200203.0 ( -67.05 by residue)
QMean score : 0.352
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