Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGLLDLLEIRKAYG---DTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGTVERNPILGFGPDGENGRS-------GGIGVVFQEPRLLPWLTVAQNVGFA--DGWLEDEHWVERLLADVGLA---------------GCGGLLPKQLSGGMAQRAAIARGLYGRPQVLLLDEPFSAVDAFTRMRLQDLLQDVVQNYEISVLLVTHDLDEAFYLADRVLLMGGRPGHIRREFHVPLARPRDRRAVELAYLRGEALTEMQRAHVL |
| 4AYW Chain:A ((371-574)) | --GALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL--------DGHDIRQLNPVWLRSKIGTVSQEPILFS-CSIAENIAYGADDPSSVTAEEIQRV-AEVANAVAFIRNFPQGFNTVVGEKGVL---LSGGQKQRIAIARALLKNPKILLLDE----LDAENEYLVQEALDRLMDGR--TVLVIAHHLS------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91912 for 1237 contacts (-74.3/contact) +
2D Compatibility (PS) -19061 + (NN) -9104 + (LL) 5596
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -131031.0 ( -105.93 by residue)
QMean score : 0.435
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