Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRKVFSSQAYRHKVVLVSGGCSGIGRALALRFARAGARLAILDLDQAALDSLVQHLRDHLGGEALGLRCDVADADAVERAVALAVERFGGIDVLVNNAGITHRGTFAETGLGVFRKVMAVNFFGAVHCTRAALPSLLE-RRGQIVVLGSLTGFAPLLYRSAYNASKHALHGLFDTLRMELEGTGVSVTLACPGFTATDLRKNALVGD---GSVTR----Q---PVQVLGSQVASPVEVAEAIFQGAARRRRLLVLSNVNWRARLLARFFPRLFEKLLVPRLSGLKPQP
3AI3 Chain:A ((2-247))
-------DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATY------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162281 for 1946 contacts (-83.4/contact) +
2D Compatibility (PS) -25142 + (NN) -10233 + (LL) 3432
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -208974.0 ( -107.39 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3AI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AI3-query.scw
PDB file :
Tito_Scwrl_3AI3.pdb
: