Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALL--------------AGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAA---------LLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGE-----FVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 3B9P Chain:A ((19-276)) | --------------------------------EWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK--YVGDGEKLV--RALFAVARHMQPSIIFIDEVDSLLSER---EASRRLKTEFLVEFDGLP------------RIVVLAATNRPQ-----ELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQK---------------------------QGSPLDTEALRRLAKITDG----------YSGSDLTALAKDAALEPIRELN-ISAMRAITEQDFHSSLKRIRRSV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108061 for 1649 contacts (-65.5/contact) +
2D Compatibility (PS) -22284 + (NN) -4489 + (LL) 8784
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -132850.0 ( -80.56 by residue)
QMean score : 0.338
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