Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNKVLVTGGTGFVGMRIISRLLEQGYEVQTTIRDLSKADKVIKTMQDNGISTERLMFVEADLSQDEHWDEAMKDCKYVLSVASPVFFGKTDDAEVMAKPAIEGIQRILRAAEHA-GVKRVVMTANFGAVGFSNKDKNSITNESHWTNED-----EPGLSVYEKSKLLAEKAAWDFVENENTIVEFATINPVAIFGPSLDAHVSGSFHLLENL--LNGSM-KRVPQIPLNVVDVRDVAELHILAMTNEQANGKRFIATADGQINLLEIAKLIKEKRPEIAQKVSTKKLPDFILSLGAKFNHQAKEGKLLLDMNRNVSNERAKTLLGWEP-IATQEEAILAAIDSMAKFHLI |
| 2C29 Chain:D ((6-324)) | --ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGT-VNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE--NNIDFITIIPTLVVGPFIMSSM--PPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKA-EGRYIC-SSHDCIILDLAKMLREKYPEYN--IPTEFK-----------G-VDEN-----LKSVCFSSKKL-TDLGFEFKYSLED-MFTGAVDTCRAKGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128179 for 2662 contacts (-48.2/contact) +
2D Compatibility (PS) -33840 + (NN) -16782 + (LL) 1952
1D Compatibility (HY) -21200 + (ID) 4650
Total energy: -202699.0 ( -76.15 by residue)
QMean score : 0.528
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