Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA
5CXI Chain:A ((18-198))
-------------QRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRS-AAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIG-----
General information:
TITO was launched using:
RESULT:
Template:
5CXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120951 for 1352 contacts (-89.5/contact) +
2D Compatibility (PS) -19725 + (NN) -12802 + (LL) 1496
1D Compatibility (HY) -23200 + (ID) 8950
Total energy: -184132.0 ( -136.19 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_5CXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CXI-query.scw
PDB file :
Tito_Scwrl_5CXI.pdb
: