Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHRIALNFEDGVTRFIHAAPGETVADAAYRQGINIPLDCRDGACGTCKCLAEAGRYALGQDYIDDALSAEEAARGYVLTCQMRAESDCVLRVPASSTLCRTGQARYEARISEVRQLSP-----STIGLSLRGEALASLAFLPGQYVNLQVPGS-EQRRAYSFSSLAKDGEVSFLIRNVP---GGLMSGFLSGTARAGDSLAMDGPLGSFYLREI----HRPLLMLAGGTGLAPFTAMLERIAEQG----------SAHPLHLVYGVTHDVDLVGLERLEAFAERIP-GFTWSACVASADSDYPRKGYVTEHIAAQH------LHEGDVDIYLCGPPPMVEAVERYLREQG--VRPANFYYEKFAASAA |
3JQQ Chain:A ((15-316)) | ---------------------------------------------------------------------------------------------------------PLKCKIVDKINLVRPNSPNEVYHLEINHNG--LFKYLEGHTCGIIPYYNQRCARLYSISSSNNMENLSVAIKIHKYTNYGYCSGFIK-NLKINDDIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMYPNNINIHYVFSYKQN---TSFYVQDEIYKRKTEFLNLFNNYKCELYICGKKSIRYKVMDILKS--DEKKKKRVHVEVY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186093 for 1737 contacts (-107.1/contact) +
2D Compatibility (PS) -24090 + (NN) -10778 + (LL) 7336
1D Compatibility (HY) -20400 + (ID) 2200
Total energy: -236225.0 ( -136.00 by residue)
QMean score : 0.426
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