Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMPLPNKTTGVTFLHQIQSSELETLTRPPLKISLERPLGEMYVENNRTGIFNYPEGTTYDFAAAAAPVYSSASLSYAASSETFGSSSLTGLHTLNNVPPSPVVFLAKLPQLSPFIHHHGQQVPYYLESEQGTFAVREAAPPTFYRSSSDNRRQSGRERMSSANDKGPPSMESTKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRLLKHKRQKEEQEQKNDVDPSEIRTASIWVNPSVKSMKLSPVLSLTAEQLISALMEAEAPIVYSEHDSTKPLSEASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMVGLIWRSVEHPGKLSFAPNLLLDRNQGRCVEGLVEIFDMLVTTATRFRMMRLRGEEFICLKSIILLNSGVYTFLSSTLESLEDTDLIHIILDKIIDTLVHFMAKSGLSLQQQQRRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDAHRIHTPKDKTTTQEEDSRSPPTTTVNGASPCLQPYYTNTEEVSLQSTV |
| 2QZO Chain:A ((9-253)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDR-------GMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGV----------LEEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLSDLLLEMLDAHRL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184056 for 1703 contacts (-108.1/contact) +
2D Compatibility (PS) -25203 + (NN) -21939 + (LL) 17916
1D Compatibility (HY) -36800 + (ID) 9400
Total energy: -259482.0 ( -152.37 by residue)
QMean score : 0.606
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