Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNVVVSGEQLQEAFREVAVMVDSTVAITAGPRGKTVGINKPYGAPEITKDGYKVMKGIKPEKPLHAAITSIFAQSCFQCNDKVGDGTTTCSILTSNMIMEALKSIAAGNDRVSIKNGMQKAKDAVLEGITSMSRTIPLEKMDEVAQVAIISANGDKDIGNSIADAVKKVGKEGVITVEESKGSKELEVELTTGMQFDRGYLSPYFITSNEKMIVEFDDPYLLITEKKLSIIQPLLPILEAVVKSGKPLLIIAEDIEGEALSTLVINKLRGGLKVTAVKAPGFGDRRKEMLEDIAALTGAKYVIKDELGIKMEDLTLEDLGTAKNVKVTKDNTTIVSGSSDSDRVKARVEQIKSQIETSTSDYDKEKLRERLAKLSGGVAVLKVGGVTEVEVKERRDRVEDALHATRAAIEEGIVPGGGVALLYASSALDKLKGGSDEEQIGINIIKKVLSAPIKRLVKNAGLESAVIIDHLTKQNDKELIYNVEAMNYANAFTAGVIDPAKVVRIAFETAISVASVLITTESMIVDVPNKEENASSSMGAGGMGGMNGF |
1MNF Chain:E ((16-525)) | --------------LRGVNVLADA-VKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALS--VPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQD-ELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGG-TVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTV-KGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254879 for 4416 contacts (-57.7/contact) +
2D Compatibility (PS) -55987 + (NN) -24340 + (LL) 1860
1D Compatibility (HY) -43600 + (ID) 12850
Total energy: -389796.0 ( -88.27 by residue)
QMean score : 0.525
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