Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNS--LARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVG--ASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGV-GFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 2EIY Chain:C ((9-301)) | ------------------------------------------WMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPE-ELEEAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEW----------KGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDGVIYALE-HSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMA------DEVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGRRPEYEGW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102443 for 2301 contacts (-44.5/contact) +
2D Compatibility (PS) -30544 + (NN) -13986 + (LL) 4948
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -163825.0 ( -71.20 by residue)
QMean score : 0.462
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