Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFGKRV--IDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGV-KVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAE-AIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM |
4YWO Chain:A ((20-442)) | -------------IIGYGAAGFAAMIKANELGVKPVLIGKGEIGGTCVNVGCVPSKRMLYIAEIYKKARE-----VTGSEVYPPFSSFQEKDGLVQEMRKTKYEDLLSYYDVELIQGEARFISPHAVKV----NGQVIEAEKFVIATGSSPL-IPRIPGLDKVGFWTNREALSPDRRIDSLAVIGGRALALEFAQMYSRMKVEVAILQRSPVLIPDWEPEASVEARRIMENDGVAVVTGVNVK---EVRKGAGKIVITDKGE---VEADEILLATGRKPNVD-LGLENAGVRLNERGGIKVDDELRTDNPHIYAAGDVLGGKMLEALAGRQGSIATENALTGSHKRVDENAVPQVIFTQPNLARVGLTEAEARAKEGEVEARVLPMSSVAKAEIINSRLGFVKMVTM--NGRIVGVHAVGENVAEMIGEAALAIRFGATVHDLIDTVHMFPTIAE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180492 for 3596 contacts (-50.2/contact) +
2D Compatibility (PS) -45640 + (NN) -11470 + (LL) 3656
1D Compatibility (HY) -26800 + (ID) 7150
Total energy: -267896.0 ( -74.50 by residue)
QMean score : 0.529
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