Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVKVTDADFDSKV-ESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
3F3R Chain:A ((13-98))
------TASEFDSAIAQDKLVVVDFYATWCGPSKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANP------------
General information:
TITO was launched using:
RESULT:
Template:
3F3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48852 for 584 contacts (-83.7/contact) +
2D Compatibility (PS) -9018 + (NN) -2329 + (LL) 1920
1D Compatibility (HY) -9600 + (ID) 2200
Total energy: -70079.0 ( -120.00 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_3F3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F3R-query.scw
PDB file :
Tito_Scwrl_3F3R.pdb
: