Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLK-QFQIGVVAETGKERAIVYENGP-----HV-TTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGGYYVE-YRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSGDYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPR-EGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGG---KLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVELVYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE |
| 1RYI Chain:A ((14-363)) | ---------------MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEE-----DVL----QLRQMD---DLDSVSWYSKEEVLEKEPYASG-DIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GE-ALFIKTPS------GDVWANHVVVASGVWSGMFFKQLGL--NNAFLPVKGECLSVWNDDIPL-TK-TLY----HDHCYIVPRKSGRLVVGATMKPGDW---SETPDLGGLESVMKKAKTMLPA--IQNMKVDRFWAGLRPGTKDGKP---YIGRHPE---D-SRILFAAGHFRNGILLAPATGALISDLIMNKE------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69901 for 2916 contacts (-24.0/contact) +
2D Compatibility (PS) -35322 + (NN) 722 + (LL) 13456
1D Compatibility (HY) -9200 + (ID) 3550
Total energy: -103795.0 ( -35.59 by residue)
QMean score : 0.399
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