Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEIFVEGIDFKNKKTSIKLSYVSQKANAFNSGFPAS--VKEVVLSGLTKTKRLFQTFNSKDNEKVIK-VLE--RLNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTHDIGVVADTATEVACLNKHLH-FHGTTDEFKSLDEVEISKIYGHPVRFVDHQHNRECCN
4ZIR Chain:A ((20-226))
---------------EKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDG---E--K-----GYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNF--YPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEF-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZIR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113055 for 1507 contacts (-75.0/contact) +
2D Compatibility (PS) -21215 + (NN) -7086 + (LL) 3612
1D Compatibility (HY) -16400 + (ID) 3350
Total energy: -157494.0 ( -104.51 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4ZIR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZIR-query.scw
PDB file :
Tito_Scwrl_4ZIR.pdb
: