Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
3LA6 Chain:A ((66-270))
--------------GNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASA-----------
General information:
TITO was launched using:
RESULT:
Template:
3LA6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88565 for 1706 contacts (-51.9/contact) +
2D Compatibility (PS) -22937 + (NN) -16900 + (LL) 1380
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -143122.0 ( -83.89 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3LA6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA6-query.scw
PDB file :
Tito_Scwrl_3LA6.pdb
: