Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSIGGLVDDASLTKFENPTIVEFRHIKKFITEYNALDHRPFTEKNDIEVAHEAQKNAAIVKGNDLYRFFSKLKQWAGADEKQNFRDLEEDFSLESFTHCTDFNPIEIYAYCISRSINNMENGVFLKYFLSYPIKYEKHQAEKIRESFERGLKKSLPRHVFDDEKTAKTFKVELRASEPCAYAISALKSYGFFKSEKLDKPVYYGVFDFGGGTTDFDFGKWEKRASPKFAYKMTHF-SSGGDKYLGGENLLELLAWETYAKNFQTLKEKDIVIAKPNYDRIDTQLFGSFMQN-SSGVRLNLQTIASQLRPFLENLDANIIEAIEENENFEIKGFEKDFKAMLFDRNGVETECDLKVDCKELLNLLKGKIEDGVANFFAGFSKVMAENIDDQCRAFHIFLGRNVSRSALVKQAFENAKEKQLKDYHQKTSKNDFKFIIYEPLGTEKSDKQILELTGEDVSNTPAYLKPTCKTGVAFGLLESRDKAQG-IEMPSISSNPVFKYDLGIEIEGK---FHAKIHRDSLKPNEY |
| 4K6N Chain:A ((32-383)) | ---------------PNFEVLATFRYDPGFARQ--SASKKEIFETPDPRLGLRDEDIRQQIINEDYSSYLRVREVNSGGDLLENIQHPDA--------WKHDCKTI------VCQRVEDMLQVIYERFFL-------------LDEQYQR-IRIALSY-----------FKIDFSTS-----------------LNDLLKLLVENLINCKEGNSE-YHEKIQKMINERQCYKMRVLVSKTGDIRIEAIPM----------------PMEPILKLTTDYDSVSTYFIKTMLNGFLIDSTINWDVVVSS-------------EPLNASAFTSFKT------------TSRDHYARARVRMQTAINNLRGS------------------------------------------------------EPTSSVSQCEILFSNKSGLLMEGSITNVAVIQKDP-NGSKKYVTPRLATGCLCGTMRHYLLRLGLIEEGDIDIGSLTVGNEVLLFNGVMGCIKGTVKTKY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 71008 for 2698 contacts (26.3/contact) +
2D Compatibility (PS) -36177 + (NN) -3192 + (LL) 13376
1D Compatibility (HY) -15600 + (ID) 2900
Total energy: 26515.0 ( 9.83 by residue)
QMean score : 0.123
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