Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFHSSSALITPFKKDLSVDEAAYETLIKRQIFQGMDACVPVGTTGESATLTHKEHMRCIEIAIETCKSTKTPSNSRMKVLAGVGSNATSESLSLAKFAQKIGADAILCVSPYYNRPTQQGLFEHYKTIAQSVEIPVMLYDVPSRTGVSIEVPTALKLFREVPNIKAIKEASGSLKRVTEL--HYYEKDFKIFSGEDSLNHSIMFSGGCGVISVTGNLMPNLISQMVNCALKFEYQQALEIQNK---LFDLHQALFVETNPIPIKMAMHLAGLIENPSYRLPLVAPSKETIKLLEKTLQQYEVIA |
3DI0 Chain:B ((11-290)) | -------ALTTPFTNN-KVNIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLV-------DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIE-PETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQ-----QSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLGF-GNYELRLPLVSLEDTDTKVLRETYDTFKAGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160470 for 2313 contacts (-69.4/contact) +
2D Compatibility (PS) -30267 + (NN) -19516 + (LL) 1596
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -235657.0 ( -101.88 by residue)
QMean score : 0.556
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