Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVIIAANNLCLQYQQNEPVI-KHANLRIKRKDFVFISGPSGSGKSTL---LRSFY----GDLKVFSGKLEVCNINMNNASKSTILDLRKNIGVVFQDYKLIQDYTIEQNIKLPMVICGIKKEECHLQLEKLLGHID----LRHKANRYPKE----LSGGEQQRVAMARAMANCPELILADEPTGNLDDYSSDKIWSLLRGMNTQLNA-TIVVVTHKFPKNFSAYHRKFYIEEGEVYEYS
3B5J Chain:A ((4-219))----ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRAGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNW----------LRRQVGVVLQDNVLLNRSIID-NISLAN--PGMSVEKV-IYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSAL-DYESEHV--IMRNMHKICKGRTVIIIAHRLSTVKNA-DRIIVMEKGKIVEQG


General information:
TITO was launched using:
RESULT:

Template: 3B5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71416 for 1477 contacts (-48.4/contact) +
2D Compatibility (PS) -20571 + (NN) -2047 + (LL) 1628
1D Compatibility (HY) -18400 + (ID) 3700
Total energy: -114506.0 ( -77.53 by residue)
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_3B5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B5J-query.scw
PDB file : Tito_Scwrl_3B5J.pdb: