Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKLVK
1OAP Chain:A ((2-109))----------------------------------------------------------------------QQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY--


General information:
TITO was launched using:
RESULT:

Template: 1OAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6283 for 800 contacts (-7.9/contact) +
2D Compatibility (PS) -11420 + (NN) -4333 + (LL) 4812
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -23124.0 ( -28.90 by residue)
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_1OAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OAP-query.scw
PDB file : Tito_Scwrl_1OAP.pdb: