Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MSVLNI-EGAKLSYQKVG--QGPILIFIPGANGTGDIFLPLAEQLKTSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKKIAFH------EPPINTFLPD--SEMWQEANEKIVQTALTKNMAEAMQLFGETL-----HIAPIDAESMSKPAVTI------DEVTKDSTTQQMKYWFTYEIRQYTSSNISL---DDFKPYVHQIT-----LLNGTDSKGSFPQDVNAFIAKQLGLTIVDIPGGHLGYIQKPAGFAKVLLSIWG----- |
| 1QTR Chain:A ((4-317)) | LRGLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSR--------PHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSR-ESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGA--GHSYDEPGILHQLMIATDRFAGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114303 for 2200 contacts (-52.0/contact) +
2D Compatibility (PS) -29051 + (NN) -14197 + (LL) 1108
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: -164443.0 ( -74.75 by residue)
QMean score : 0.391
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