Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNLKDTVKLANGVEMPRLGFGVW---KVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKE----SGIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVKGKFKD--------------------TWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIA--PMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGK-----------LLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF |
| 3UZZ Chain:B ((30-327)) | ------IPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIHVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122813 for 2130 contacts (-57.7/contact) +
2D Compatibility (PS) -28136 + (NN) -11171 + (LL) -136
1D Compatibility (HY) -24800 + (ID) 5450
Total energy: -192506.0 ( -90.38 by residue)
QMean score : 0.546
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