Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMYAKNNTSGKDMLSLLEWNKEELTDIIKLAVAMKTNPA---HYSHILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSEYIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEGIKLAYIGDGNNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTEDSKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELVSGAKPDYHFLHCLPAHREEEVTTEIIDGIHSVIYQQAGNRLHAQKALLAAILEAK
1OTH Chain:A ((1-311))-----KVQLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAF-QGYQVTMKTAKVAASDWTFLHCLPRKP-EEVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTD-


General information:
TITO was launched using:
RESULT:

Template: 1OTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203945 for 2735 contacts (-74.6/contact) +
2D Compatibility (PS) -33877 + (NN) -17724 + (LL) 700
1D Compatibility (HY) -25600 + (ID) 6100
Total energy: -286546.0 ( -104.77 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_1OTH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OTH-query.scw
PDB file : Tito_Scwrl_1OTH.pdb: