Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
1KDN Chain:C ((9-148))-ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVK------


General information:
TITO was launched using:
RESULT:

Template: 1KDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67109 for 1077 contacts (-62.3/contact) +
2D Compatibility (PS) -14867 + (NN) -4243 + (LL) 880
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -103639.0 ( -96.23 by residue)
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_1KDN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KDN-query.scw
PDB file : Tito_Scwrl_1KDN.pdb: