Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEF--AQNVAIVHQSNVLPNELMVKELLYFGRLPYKNWRMTRTKEDDLAVERALM---QTELTEKAEKFVD-------------SLSGGERQRVFIATALVQDTPILLLDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF
4HLU Chain:C ((12-227))
IELNSVSFRYNG-DYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLAA-AGEIFLDGSP-----ADPFLLRKNVGYVFQN---PSSQIIGA----------------TVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSGLAAADPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESL-KNEGKGIILVTHEL-EYLDDMDFILHISNGTIDFCGSWEEFV---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HLU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104124 for 1505 contacts (-69.2/contact) +
2D Compatibility (PS) -21790 + (NN) -7285 + (LL) 4128
1D Compatibility (HY) -18000 + (ID) 3850
Total energy: -150921.0 ( -100.28 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4HLU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLU-query.scw
PDB file :
Tito_Scwrl_4HLU.pdb
: