Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
3AZ8 Chain:R ((11-153))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFALS----
General information:
TITO was launched using:
RESULT:
Template:
3AZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87228 for 990 contacts (-88.1/contact) +
2D Compatibility (PS) -14626 + (NN) -1489 + (LL) 232
1D Compatibility (HY) -18000 + (ID) 3400
Total energy: -124511.0 ( -125.77 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3AZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZ8-query.scw
PDB file :
Tito_Scwrl_3AZ8.pdb
: