Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLVATAP---RVAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALGDIVCS------------------------------YGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYD-PAQFAMSGVRD-AHVRAGDYVVVVGL-GAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL |
| 2EIH Chain:A ((1-342)) | MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNH-LDVWVRKGVASP----------------------KLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPE-AN--LAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR-VIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFA-HVFYRQLSILGSTMAS-----------KSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRL-LEERR-VFGKVVLQV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148616 for 2723 contacts (-54.6/contact) +
2D Compatibility (PS) -33774 + (NN) -15975 + (LL) 1728
1D Compatibility (HY) -10800 + (ID) 3950
Total energy: -211387.0 ( -77.63 by residue)
QMean score : 0.432
|
|
|