Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFINNYTLKIGN-RILLENTNLDFEEGEINHLLGRNGSGKSQLAKDFI--INR-GNYFSNDIYED-------TLIISSYSNLPSDVT-------INDLERTIP----------WKLSKEIYQLLNINQISKTVKLKQLSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
| 3GFO Chain:A ((8-235)) | LKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLK-DKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQK-ELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96640 for 1560 contacts (-61.9/contact) +
2D Compatibility (PS) -20767 + (NN) -5273 + (LL) 156
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -132274.0 ( -84.79 by residue)
QMean score : 0.422
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