Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQISLGSTVIQAGKKNKDLKKLRKKVGIV--FQFPEHQLFEETVLKDISFGPMNFG-------------VKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL
1G9X Chain:C ((22-235))
--------ALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDIT----NKEPAELYH-YGIVRTFQTPQ-PLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSH-LYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKG-ITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEG-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119635 for 1529 contacts (-78.2/contact) +
2D Compatibility (PS) -21584 + (NN) -10051 + (LL) 5672
1D Compatibility (HY) -18400 + (ID) 3850
Total energy: -167848.0 ( -109.78 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1G9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9X-query.scw
PDB file :
Tito_Scwrl_1G9X.pdb
: